Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903649.1_cds_XP_016453737.1_47834
CDS Infomation

[gene=LOC107778070] [db_xref=GeneID:107778070] [protein=glyoxysomal processing protease, glyoxysomal-like] [protein_id=XP_016453737.1] [location=complement(join(14099..14361,14556..14647,15035..15221,16405..17146,17236..17330,17415..17500,17844..17947,18103..18225,19569..19712,20230..20310,20400..20447,20786..20972,21076..21122,21225..21290))] [gbkey=CDS]
Sequence

ATGGGTCTTCCTGAAGTGGTTGATGTTGCCCGCAATTATGCCGTCATGGTCAGAATTCAA
GGCCCAGACCCTAAAGGCCTAAAAATGCGAAAACATGCTTTCCACCTGTACAATTCTGGG
AAGACGACACTATCAGCATCTGGGATGCTTTTGCCCAGTTCCTTTGTTAATGCTTCAGTG
TCTAAGCAGATTCAAGGTGAAAGCAAGTTGCACTCTTTTGGAGGTCACTTCTTGGTTTTA
ACAGTTGCTTCTGTTATTGAGCCTTTTGTTGTACAACAGGATAGAGGGGACATATCAAAG
GATAAGCCGGAGCTGATTCCTGGTGCTCAAATTGATATACTGTGGGAGGGAGGAAATACA
TTGCAAAATGATATCAAAGTGACCAACAAAGAGGGTTTGAACTGGCTACCTGCAGAACTC
CTAAGAGTGGTTGACATCCCTGTGTCATCTGCTGCTGTCCAGTCCCTAGTTGAAGGTTCG
TCTAGTTCAATTGAACATGGGTGGGAGGTTGGTTGGTCCCTAGCTGCCTATGGAAATTCC
CGTCAATCATTTACTAACACTAAGCGCACACAGGTTGAGAAAATTTCTTTCCCAAGTCAA
ACTCCAATGATGGAGGCGCAGTCCAGCCTGCCAAGTGTGATAGGAACATCAACTACAAGA
ATTGCTCTTCTCAGAGTTTCTTCAAATCCATATGAGGACCTGCCTGCATTAAAAGTGGCT
ACCTGGAGTAGGAGAGGTGATCTTCTTCTGGGTATGGGTTCTCCTTTCGGTATCTTGTCT
CCCAGTCACTTTTTCAACAGCATATCAGTTGGGTCCATTGCAAACAGCTATCCACCTAGT
CCACAGAATAAAGCACTGTTGATTGCTGACATCCGTTGTCTCCCTGGAATGGAAGGTAGC
CCAGTGTTAGGGGAACATGCAGAGCTTATTGGTGTTCTGTCTCGGCCACTCAGACAAAGG
GCTACTGCTGCTGAAATTCAGATGGTGATTCCATGGGAAGCTATTACATCTGCTTGTGGT
AGCCTGCTTAAAGAAGAGCTACAAACTAGGAGAAAGATCCATTTTGGTAATGGAAACCTA
ATCAGCGTTAAAAAAGAATCATTCTCCAATAATATTCAGGATGGACATGCCAATGATACT
CAAGAGCATCTCCAAATAGATCCTGTTCCCCCATCCTTGATTGAGAAAGCAATGACATCT
ATCTGTCTTATCGCTGTTGATGATGGAGCATGGGCTTCTGGAGTTTTGCTCAACAAGCAG
GGTCTTCTTCTTACAAATGCTCATCTTCTAGAGCCATGGAGATTTGGAAAAACATCTGTA
AACGGTTCAGGATATAACACCAAATCTGATGTAGTTCTCATCCCTTCTGATCAATCTGAG
CATCCAGGGGTTGAGAAATTTGACATTCAGCGTAGGAATAAACATTTGATTCAAAAGGAA
CTAAAAACTCCGCATTTCTTGGTTGACAATGAGCAATGTAGCTTTAGAGTTAACCTGGCA
AACACAGGCAGTAGGACCATTCGTGTTCGCTTGGATTTTATGGATCCCTGGGTATGGACA
AATGCAAAGGTAGTTCATGTCTCCAGAGGACCTCTGGATGTTGCATTACTACAACTTGAG
CTAGTTCCAGATCAGCTCTGTCCCATTATTGTTGACTTCATGTGCCCATCCCCCGGATCA
AAAGCATACATTCTCGGACATGGGCTATTTGGACCACGATGTGACTTCCTTCCATCTGCT
TGTGTGGGTGCAATAGCTAAGGTAGTTGAAGCAAAGCGGCCTCTGCTCAACCAATCAAGT
TTAGGAGGACATTTTCCGGCAATGCTTGAAACAACGGCTGCTGTACACCCTGGTGGTAGT
GGTGGAGCTGTTGTTAATTCAGAAGGACACATGATTGCCCTTGTAACAAGTAATGCTAGA
CATGGTGGAGGGACGGTCATTCCACATTTGAACTTCAGCATTCCATGTGCAGCTTTAGAG
CCCATCTTCAAGTTTGCTGAAGACATGCAGAATCTATCATTGGAATATCTTGACAAACCA
GATGAACAGCTTTCTTCTGTGTGGGCATTAACTCCGCCTTTATCTTCCAAGCAAAGTCCC
TCTATGCTTCATCTGCCAATGCTTCCTCGAGGAGATAGTGATGGTGATACAAAGGGTTCT
AAGTTTGCAAAGTTTATAGCTGACAGCGAGGCGATGCTGAAGAGTGCAACTCAACTTGGC
AAGGTTGAACGTCTTTCAAATAAACTCGTGCACAGTAAGTTATGA

Peptide Sequence

PEP ID

XP_016453737.1
PEP Infomation

PREDICTED: glyoxysomal processing protease, glyoxysomal-like [Nicotiana tabacum]
Sequence

MGLPEVVDVARNYAVMVRIQGPDPKGLKMRKHAFHLYNSGKTTLSASGMLLPSSFVNASV
SKQIQGESKLHSFGGHFLVLTVASVIEPFVVQQDRGDISKDKPELIPGAQIDILWEGGNT
LQNDIKVTNKEGLNWLPAELLRVVDIPVSSAAVQSLVEGSSSSIEHGWEVGWSLAAYGNS
RQSFTNTKRTQVEKISFPSQTPMMEAQSSLPSVIGTSTTRIALLRVSSNPYEDLPALKVA
TWSRRGDLLLGMGSPFGILSPSHFFNSISVGSIANSYPPSPQNKALLIADIRCLPGMEGS
PVLGEHAELIGVLSRPLRQRATAAEIQMVIPWEAITSACGSLLKEELQTRRKIHFGNGNL
ISVKKESFSNNIQDGHANDTQEHLQIDPVPPSLIEKAMTSICLIAVDDGAWASGVLLNKQ
GLLLTNAHLLEPWRFGKTSVNGSGYNTKSDVVLIPSDQSEHPGVEKFDIQRRNKHLIQKE
LKTPHFLVDNEQCSFRVNLANTGSRTIRVRLDFMDPWVWTNAKVVHVSRGPLDVALLQLE
LVPDQLCPIIVDFMCPSPGSKAYILGHGLFGPRCDFLPSACVGAIAKVVEAKRPLLNQSS
LGGHFPAMLETTAAVHPGGSGGAVVNSEGHMIALVTSNARHGGGTVIPHLNFSIPCAALE
PIFKFAEDMQNLSLEYLDKPDEQLSSVWALTPPLSSKQSPSMLHLPMLPRGDSDGDTKGS
KFAKFIADSEAMLKSATQLGKVERLSNKLVHSKL

Transcript Sequence

Gene sequence data has not been registered.